Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system tube protein hcp | CTM90_03775 | Not Available | Positive | 905022 - 905540 | 19127.6 |
| type vi secretion system tip protein vgrg | CTM90_03780 | Not Available | Positive | 905646 - 907673 | 75089.9 |
| calcium-binding protein | CTM90_03785 | Not Available | Positive | 907677 - 910214 | 96636.9 |
| hypothetical protein | CTM90_03790 | Not Available | Positive | 910211 - 910918 | 27376.8 |
| hypothetical protein | CTM90_03795 | Not Available | Positive | 910939 - 911340 | 15082.9 |
| hypothetical protein | CTM90_03800 | Not Available | Positive | 911358 - 911723 | 13943.8 |
| hypothetical protein | CTM90_03805 | Not Available | Positive | 911833 - 912336 | 19366.5 |
| hypothetical protein | CTM90_03810 | Not Available | Positive | 912445 - 912669 | 8513.4 |
| hypothetical protein | CTM90_03815 | Not Available | Positive | 913045 - 913653 | 24057.7 |
| hypothetical protein | CTM90_03820 | Not Available | Negative | 914039 - 915058 | 38603.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

