Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxyphosphogluconate aldolase | CTM90_01970 | Not Available | Positive | 449078 - 449710 | 22567.5 |
| dj-1 family protein | CTM90_01975 | Not Available | Positive | 449720 - 450298 | 21518.6 |
| porin | CTM90_01980 | Not Available | Positive | 450532 - 452067 | 56191.2 |
| yebc/pmpr family dna-binding regulatory protein | CTM90_01985 | Not Available | Negative | 452220 - 452942 | 26673.7 |
| iclr family transcriptional regulator | CTM90_01990 | Not Available | Positive | 453327 - 454061 | 26846.5 |
| arginase | CTM90_01995 | Not Available | Positive | 454107 - 455078 | 36036.3 |
| amidohydrolase | CTM90_02000 | Not Available | Negative | 455308 - 456744 | 53095.4 |
| duf535 domain-containing protein | CTM90_02005 | Not Available | Positive | 457129 - 458019 | 35097.0 |
| acrb/acrd/acrf family protein | CTM90_02010 | Not Available | Negative | 458085 - 461135 | 111291.0 |
| efflux rnd transporter periplasmic adaptor subunit | CTM90_02015 | Not Available | Negative | 461139 - 462245 | 40164.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

