Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | CTM90_18985 | Not Available | Negative | 4229045 - 4231414 | 89515.8 |
| abc transporter substrate-binding protein | CTM90_18990 | Not Available | Negative | 4231417 - 4232658 | 47366.0 |
| yfbu family protein | CTM90_18995 | Not Available | Negative | 4232869 - 4233369 | 19843.6 |
| formate--tetrahydrofolate ligase | CTM90_19000 | Not Available | Negative | 4233628 - 4235382 | 62251.4 |
| pyruvate formate lyase 1-activating protein | CTM90_19005 | Not Available | Negative | 4236000 - 4236746 | 28611.2 |
| u32 family peptidase | CTM90_19010 | Not Available | Positive | 4237056 - 4238951 | 70750.2 |
| formate c-acetyltransferase | CTM90_19015 | Not Available | Negative | 4239142 - 4241415 | 84253.2 |
| formate transporter foca | CTM90_19020 | Not Available | Negative | 4241472 - 4242344 | 31591.2 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | CTM90_19025 | Not Available | Negative | 4242828 - 4244576 | 65916.3 |
| exodeoxyribonuclease iii | CTM90_19030 | Not Available | Negative | 4244797 - 4245603 | 30933.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

