Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | CTM90_18635 | Not Available | Negative | 4167331 - 4169292 | 74067.1 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CTM90_18640 | Not Available | Negative | 4169299 - 4169769 | 17458.2 |
| ribosome silencing factor | CTM90_18645 | Not Available | Negative | 4169776 - 4170093 | 11889.3 |
| dna polymerase iii subunit delta | CTM90_18650 | Not Available | Negative | 4170277 - 4171305 | 39157.8 |
| hypothetical protein | CTM90_18655 | Not Available | Negative | 4171302 - 4172003 | 25989.8 |
| leucine--trna ligase | CTM90_18660 | Not Available | Negative | 4172131 - 4174707 | 97109.2 |
| zinc ribbon-containing protein | CTM90_18665 | Not Available | Positive | 4175067 - 4175549 | 18038.6 |
| hypothetical protein | CTM90_18670 | Not Available | Negative | 4175655 - 4176350 | 24425.8 |
| apolipoprotein n-acyltransferase | CTM90_18675 | Not Available | Negative | 4176467 - 4178020 | 57879.1 |
| magnesium/cobalt transporter corc | CTM90_18680 | Not Available | Negative | 4178027 - 4178899 | 33146.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

