Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-dependent thiol peroxidase | CTM90_18585 | Not Available | Negative | 4158365 - 4158835 | 17585.2 |
| glycine cleavage system transcriptional repressor | CTM90_18590 | Not Available | Negative | 4158863 - 4159420 | 20913.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CTM90_18595 | Not Available | Positive | 4159724 - 4160602 | 31096.6 |
| outer membrane protein assembly factor bamc | CTM90_18600 | Not Available | Positive | 4160634 - 4161647 | 37330.8 |
| lipoyl synthase | CTM90_18605 | Not Available | Negative | 4161730 - 4162698 | 36437.0 |
| lipoyl(octanoyl) transferase lipb | CTM90_18610 | Not Available | Negative | 4162698 - 4163345 | 24012.7 |
| hypothetical protein | CTM90_18615 | Not Available | Negative | 4163465 - 4163737 | 10156.3 |
| d-alanyl-d-alanine carboxypeptidase | CTM90_18620 | Not Available | Negative | 4163933 - 4165108 | 42698.1 |
| septal ring lytic transglycosylase rlpa family protein | CTM90_18625 | Not Available | Negative | 4165343 - 4166212 | 32397.8 |
| rod shape-determining protein roda | CTM90_18630 | Not Available | Negative | 4166213 - 4167334 | 40839.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

