Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | CTM90_17860 | Not Available | Negative | 4023521 - 4023778 | 9435.64 |
| ribonuclease p protein component | CTM90_17865 | Not Available | Negative | 4023745 - 4024101 | 13681.7 |
| 50s ribosomal protein l34 | CTM90_17870 | Not Available | Negative | 4024114 - 4024251 | 5253.62 |
| amino acid abc transporter atp-binding protein | CTM90_17875 | Not Available | Negative | 4024436 - 4025170 | 27263.2 |
| amino acid abc transporter permease | CTM90_17880 | Not Available | Negative | 4025167 - 4025838 | 24955.4 |
| amino acid abc transporter substrate-binding protein | CTM90_17885 | Not Available | Negative | 4025874 - 4026629 | 28168.6 |
| chromosomal replication initiator protein dnaa | CTM90_17890 | Not Available | Positive | 4027070 - 4028494 | 53293.0 |
| dna polymerase iii subunit beta | CTM90_17895 | Not Available | Positive | 4028496 - 4029593 | 40503.6 |
| dna replication and repair protein recf | CTM90_17900 | Not Available | Positive | 4029597 - 4030679 | 40690.1 |
| dna topoisomerase (atp-hydrolyzing) subunit b | CTM90_17905 | Not Available | Positive | 4030699 - 4033113 | 89809.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

