Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1488 domain-containing protein | CTM90_17610 | Not Available | Negative | 3972175 - 3972441 | 10121.0 |
| shikimate dehydrogenase | CTM90_17615 | Not Available | Negative | 3972448 - 3973275 | 29483.2 |
| oxygen-dependent coproporphyrinogen oxidase | CTM90_17620 | Not Available | Negative | 3973284 - 3974195 | 35273.5 |
| threonylcarbamoyl-amp synthase | CTM90_17625 | Not Available | Negative | 3974199 - 3974756 | 20239.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CTM90_17630 | Not Available | Positive | 3974950 - 3975435 | 16898.4 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CTM90_17635 | Not Available | Positive | 3975438 - 3976559 | 40753.0 |
| dna topoisomerase | CTM90_17640 | Not Available | Negative | 3976627 - 3977184 | 20900.1 |
| duf494 domain-containing protein | CTM90_17645 | Not Available | Negative | 3977295 - 3977768 | 18449.9 |
| dna-protecting protein dpra | CTM90_17650 | Not Available | Negative | 3977771 - 3978865 | 39138.5 |
| lysm peptidoglycan-binding domain-containing protein | CTM90_17655 | Not Available | Negative | 3978868 - 3979926 | 39989.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

