Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase accessory protein hypb | CTM90_17105 | Not Available | Positive | 3860991 - 3861728 | 27557.8 |
| hydrogenase maturation nickel metallochaperone hypa | CTM90_17110 | Not Available | Positive | 3861743 - 3862090 | 12671.2 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | CTM90_17115 | Not Available | Negative | 3862240 - 3862518 | 11076.5 |
| damage-inducible protein j | CTM90_17120 | Not Available | Negative | 3862515 - 3862799 | 11094.1 |
| n-acetyltransferase | CTM90_17125 | Not Available | Positive | 3863093 - 3863530 | 16373.5 |
| recx family transcriptional regulator | CTM90_17130 | Not Available | Negative | 3863567 - 3864355 | 30188.0 |
| hypothetical protein | CTM90_17135 | Not Available | Negative | 3864476 - 3866197 | 65129.5 |
| hyad/hybd family hydrogenase maturation endopeptidase | CTM90_17140 | Not Available | Negative | 3866194 - 3866739 | 20226.4 |
| ni/fe-hydrogenase, b-type cytochrome subunit | CTM90_17145 | Not Available | Negative | 3866742 - 3867446 | 27046.3 |
| nickel-dependent hydrogenase large subunit | CTM90_17150 | Not Available | Negative | 3867459 - 3869162 | 62767.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

