Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | CTM90_16705 | Not Available | Negative | 3778375 - 3779235 | 33236.4 |
| proline--trna ligase | CTM90_16710 | Not Available | Negative | 3779431 - 3781149 | 63386.6 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CTM90_16715 | Not Available | Negative | 3781281 - 3781979 | 25606.4 |
| type b 50s ribosomal protein l31 | CTM90_16720 | Not Available | Positive | 3782102 - 3782362 | 10012.8 |
| 50s ribosomal protein l36 | CTM90_16725 | Not Available | Positive | 3782362 - 3782505 | 5484.96 |
| metq/nlpa family lipoprotein | CTM90_16730 | Not Available | Negative | 3782587 - 3783411 | 29651.2 |
| abc transporter permease | CTM90_16735 | Not Available | Negative | 3783480 - 3784166 | 23847.3 |
| d-methionine abc transporter, atp-binding protein | CTM90_16740 | Not Available | Negative | 3784156 - 3785190 | 37638.8 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | CTM90_16745 | Not Available | Positive | 3785538 - 3786092 | 20479.4 |
| hypothetical protein | CTM90_16750 | Not Available | Negative | 3786166 - 3787173 | 36830.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

