Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ump kinase | CTM90_16605 | Not Available | Positive | 3756235 - 3756963 | 26086.7 |
| ribosome recycling factor | CTM90_16610 | Not Available | Positive | 3757023 - 3757580 | 20767.1 |
| isoprenyl transferase | CTM90_16615 | Not Available | Positive | 3757661 - 3758425 | 28545.3 |
| cdp-diglyceride synthetase | CTM90_16620 | Not Available | Positive | 3758531 - 3759379 | 30531.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CTM90_16625 | Not Available | Positive | 3759442 - 3760638 | 42958.1 |
| sigma e protease regulator rsep | CTM90_16630 | Not Available | Positive | 3760635 - 3761990 | 49244.3 |
| outer membrane protein assembly factor bama | CTM90_16635 | Not Available | Positive | 3762027 - 3764450 | 90141.7 |
| molecular chaperone | CTM90_16640 | Not Available | Positive | 3764471 - 3764980 | 18896.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | CTM90_16645 | Not Available | Positive | 3765085 - 3766113 | 36194.6 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | CTM90_16650 | Not Available | Positive | 3766213 - 3766668 | 17018.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

