Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m23 | CTM90_01325 | Not Available | Positive | 314882 - 316222 | 49954.9 |
| deacylase | CTM90_01330 | Not Available | Positive | 316553 - 317611 | 38270.8 |
| hlyc/corc family transporter | CTM90_01335 | Not Available | Positive | 317742 - 319067 | 48763.9 |
| sodium/proline symporter putp | CTM90_01340 | Not Available | Negative | 319129 - 320625 | 53150.6 |
| hypothetical protein | CTM90_01345 | Not Available | Negative | 320794 - 321456 | 24634.8 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | CTM90_01350 | Not Available | Negative | 321459 - 324602 | 116407.0 |
| arac family transcriptional regulator | CTM90_01355 | Not Available | Negative | 324892 - 325659 | 28629.2 |
| hypothetical protein | CTM90_01360 | Not Available | Positive | 326046 - 327257 | 44041.6 |
| helix-turn-helix transcriptional regulator | CTM90_01365 | Not Available | Positive | 327777 - 328460 | 25916.2 |
| pyridoxamine 5'-phosphate oxidase | CTM90_01370 | Not Available | Negative | 328482 - 329120 | 24519.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

