Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspd | CTM90_14885 | Not Available | Negative | 3364111 - 3366117 | 72869.9 |
| type ii secretion system protein gspc | CTM90_14890 | Not Available | Negative | 3366157 - 3367053 | 32781.3 |
| ribosome-associated heat shock protein hsp15 | CTM90_14895 | Not Available | Positive | 3367345 - 3367752 | 15525.6 |
| hsp33 family molecular chaperone hslo | CTM90_14900 | Not Available | Positive | 3367890 - 3368768 | 32354.0 |
| phosphoenolpyruvate carboxykinase (atp) | CTM90_14905 | Not Available | Positive | 3369093 - 3370724 | 60048.9 |
| asma family protein | CTM90_14910 | Not Available | Positive | 3370899 - 3372854 | 74625.0 |
| gnat family n-acetyltransferase | CTM90_14915 | Not Available | Negative | 3372812 - 3373729 | 34944.1 |
| d-tyrosyl-trna(tyr) deacylase | CTM90_14920 | Not Available | Negative | 3373769 - 3374206 | 15664.8 |
| virulence factor brkb family protein | CTM90_14925 | Not Available | Negative | 3374203 - 3375171 | 35821.4 |
| duf2959 domain-containing protein | CTM90_14930 | Not Available | Positive | 3375315 - 3375962 | 24273.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

