Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tsse | CTM90_14535 | Not Available | Negative | 3294890 - 3295327 | 16293.5 |
| type vi secretion system contractile sheath large subunit | CTM90_14540 | Not Available | Negative | 3295332 - 3296810 | 55648.8 |
| type vi secretion system contractile sheath small subunit | CTM90_14545 | Not Available | Negative | 3296864 - 3297361 | 18149.6 |
| hypothetical protein | CTM90_14550 | Not Available | Negative | 3298056 - 3298331 | 10370.4 |
| sensor histidine kinase | CTM90_14555 | Not Available | Negative | 3298495 - 3300540 | 77476.1 |
| sigma-54-dependent fis family transcriptional regulator | CTM90_14560 | Not Available | Negative | 3300542 - 3302020 | 55346.1 |
| tungsten abc transporter substrate-binding protein | CTM90_14565 | Not Available | Positive | 3302314 - 3303138 | 30111.3 |
| abc transporter permease | CTM90_14570 | Not Available | Positive | 3303224 - 3303925 | 25303.7 |
| abc transporter atp-binding protein | CTM90_14575 | Not Available | Positive | 3303945 - 3304649 | 26446.0 |
| molybdenum cofactor guanylyltransferase moba | CTM90_14580 | Not Available | Positive | 3304636 - 3305229 | 21911.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

