Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein tssa | CTM90_14485 | Not Available | Negative | 3281809 - 3283257 | 53989.9 |
| type vi secretion system-associated protein tago | CTM90_14490 | Not Available | Negative | 3283267 - 3283929 | 24331.5 |
| sigma-54-dependent fis family transcriptional regulator | CTM90_14495 | Not Available | Negative | 3283935 - 3285437 | 57026.3 |
| type vi secretion system atpase tssh | CTM90_14500 | Not Available | Negative | 3285443 - 3288049 | 96721.7 |
| type iv secretion protein dotu | CTM90_14505 | Not Available | Negative | 3288059 - 3288859 | 30423.2 |
| type vi secretion system baseplate subunit tssk | CTM90_14510 | Not Available | Negative | 3288865 - 3290199 | 50193.7 |
| type vi secretion system lipoprotein tssj | CTM90_14515 | Not Available | Negative | 3290199 - 3290636 | 16573.6 |
| type vi secretion system-associated fha domain protein tagh | CTM90_14520 | Not Available | Negative | 3290683 - 3292137 | 54708.5 |
| type vi secretion system baseplate subunit tssg | CTM90_14525 | Not Available | Negative | 3292150 - 3293157 | 38184.5 |
| type vi secretion system baseplate subunit tssf | CTM90_14530 | Not Available | Negative | 3293121 - 3294887 | 67094.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

