Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine endopeptidase | CTM90_14435 | Not Available | Positive | 3271230 - 3272192 | 35106.8 |
| alpha/beta hydrolase | CTM90_14440 | Not Available | Negative | 3272233 - 3273228 | 36674.7 |
| hypothetical protein | CTM90_14445 | Not Available | Negative | 3273466 - 3273822 | 13214.7 |
| hypothetical protein | CTM90_14450 | Not Available | Negative | 3273863 - 3274501 | 23228.8 |
| histidine phosphatase family protein | CTM90_14455 | Not Available | Negative | 3274664 - 3275245 | 21736.7 |
| hypothetical protein | CTM90_14460 | Not Available | Positive | 3275441 - 3275641 | 7900.35 |
| oxidase | CTM90_14465 | Not Available | Positive | 3275807 - 3276388 | 21503.5 |
| type vi secretion system paar protein | CTM90_14470 | Not Available | Negative | 3276432 - 3276716 | 9389.1 |
| hypothetical protein | CTM90_14475 | Not Available | Negative | 3276764 - 3278224 | 54924.9 |
| type vi secretion system membrane subunit tssm | CTM90_14480 | Not Available | Negative | 3278240 - 3281785 | 135286.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

