Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome-c oxidase, cbb3-type subunit i | CTM90_14185 | Not Available | Positive | 3217470 - 3218900 | 53412.7 |
| cytochrome-c oxidase, cbb3-type subunit ii | CTM90_14190 | Not Available | Positive | 3218912 - 3219523 | 23022.6 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | CTM90_14195 | Not Available | Positive | 3219534 - 3219713 | 6896.22 |
| cytochrome-c oxidase, cbb3-type subunit iii | CTM90_14200 | Not Available | Positive | 3219710 - 3220702 | 36146.8 |
| nitrogen fixation protein fixh | CTM90_14205 | Not Available | Positive | 3220798 - 3221289 | 18939.8 |
| copper-translocating p-type atpase | CTM90_14210 | Not Available | Positive | 3221286 - 3223706 | 89155.5 |
| cbb3-type cytochrome oxidase assembly protein ccos | CTM90_14215 | Not Available | Positive | 3223707 - 3223907 | 7562.0 |
| sulfite exporter taue/safe family protein | CTM90_14220 | Not Available | Positive | 3223910 - 3224587 | 24286.7 |
| transcriptional regulator fnr | CTM90_14225 | Not Available | Positive | 3224663 - 3225418 | 28290.4 |
| universal stress protein uspe | CTM90_14230 | Not Available | Positive | 3225698 - 3226639 | 35223.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

