Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridylate synthase | CTM90_14080 | Not Available | Negative | 3193929 - 3194576 | 24598.7 |
| nadp-dependent isocitrate dehydrogenase | CTM90_14085 | Not Available | Positive | 3194719 - 3195972 | 45658.8 |
| cold shock domain protein cspd | CTM90_14090 | Not Available | Negative | 3196398 - 3196619 | 8084.45 |
| atp-dependent clp protease adapter clps | CTM90_14095 | Not Available | Positive | 3196877 - 3197197 | 12245.8 |
| atp-dependent clp protease atp-binding subunit clpa | CTM90_14100 | Not Available | Positive | 3197242 - 3199506 | 83637.1 |
| translation initiation factor if-1 | CTM90_14105 | Not Available | Negative | 3199639 - 3199857 | 8219.13 |
| arginyltransferase | CTM90_14110 | Not Available | Negative | 3200057 - 3200749 | 27135.2 |
| leucyl/phenylalanyl-trna--protein transferase | CTM90_14115 | Not Available | Negative | 3200753 - 3201466 | 26875.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | CTM90_14120 | Not Available | Negative | 3201642 - 3203363 | 63430.8 |
| cysteine/glutathione abc transporter permease/atp-binding protein cydd | CTM90_14125 | Not Available | Negative | 3203356 - 3205137 | 65431.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

