Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane metalloprotease | CTM90_13630 | Not Available | Positive | 3088868 - 3089719 | 31313.7 |
| 3',5'-cyclic-nucleotide phosphodiesterase | CTM90_13635 | Not Available | Negative | 3089833 - 3090816 | 36288.1 |
| metalloprotease | CTM90_13640 | Not Available | Negative | 3091086 - 3091949 | 31370.2 |
| trna dihydrouridine(16) synthase dusc | CTM90_13645 | Not Available | Negative | 3092190 - 3093134 | 35336.5 |
| prepilin peptidase | CTM90_13650 | Not Available | Positive | 3093316 - 3093939 | 23028.7 |
| disulfide bond formation protein dsbb | CTM90_13655 | Not Available | Negative | 3094018 - 3094530 | 19478.1 |
| na(+)/h(+) antiporter nhab | CTM90_13660 | Not Available | Negative | 3094760 - 3096349 | 57669.9 |
| fatty acid metabolism transcriptional regulator fadr | CTM90_13665 | Not Available | Positive | 3096946 - 3097797 | 32794.2 |
| spovr family protein | CTM90_13670 | Not Available | Negative | 3097879 - 3099408 | 60304.3 |
| hypothetical protein | CTM90_13675 | Not Available | Negative | 3099495 - 3100766 | 48842.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

