Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | CTM90_13580 | Not Available | Positive | 3077833 - 3079608 | 63863.3 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | CTM90_13585 | Not Available | Positive | 3079592 - 3080410 | 30181.1 |
| o-succinylbenzoate synthase | CTM90_13590 | Not Available | Positive | 3080463 - 3081437 | 35748.9 |
| o-succinylbenzoate--coa ligase | CTM90_13595 | Not Available | Positive | 3081425 - 3082855 | 53028.5 |
| mfs transporter | CTM90_13600 | Not Available | Negative | 3082940 - 3084817 | 69542.6 |
| tetr/acrr family transcriptional regulator | CTM90_13605 | Not Available | Negative | 3084832 - 3085428 | 22708.1 |
| preprotein translocase subunit tim44 | CTM90_13610 | Not Available | Positive | 3086020 - 3086880 | 31462.7 |
| tigr02647 family protein | CTM90_13615 | Not Available | Positive | 3087134 - 3087379 | 8869.73 |
| ykgj family cysteine cluster protein | CTM90_13620 | Not Available | Negative | 3087399 - 3087653 | 8966.94 |
| ycgn family cysteine cluster protein | CTM90_13625 | Not Available | Positive | 3087919 - 3088356 | 16941.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

