Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s dicluster domain-containing protein | CTM90_01175 | Not Available | Negative | 267573 - 268121 | 20573.6 |
| hydrogenase large subunit | CTM90_01180 | Not Available | Negative | 268131 - 269876 | 66231.4 |
| hydrogenase 3 membrane subunit | CTM90_01185 | Not Available | Negative | 269886 - 270839 | 34780.3 |
| hydrogenase 4 subunit b | CTM90_01190 | Not Available | Negative | 270839 - 272551 | 61102.0 |
| 4fe-4s dicluster domain-containing protein | CTM90_01195 | Not Available | Negative | 272758 - 273366 | 21351.8 |
| duf1275 domain-containing protein | CTM90_01200 | Not Available | Positive | 273655 - 274305 | 23645.0 |
| selenocysteine-specific translation elongation factor | CTM90_01210 | Not Available | Negative | 274924 - 276747 | 67434.3 |
| l-seryl-trna(sec) selenium transferase | CTM90_01215 | Not Available | Negative | 276747 - 278174 | 52547.6 |
| Trna-sec(p) | Not Available | Not Available | Positive | 278283 - 278370 | Not Available |
| ggdef domain-containing protein | CTM90_01220 | Not Available | Negative | 278489 - 280168 | 64961.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

