Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | CTM90_12570 | Not Available | Negative | 2841671 - 2842399 | 26575.6 |
| dna-binding transcriptional regulator oxyr | CTM90_12575 | Not Available | Positive | 2842559 - 2843458 | 33268.7 |
| penicillin-sensitive transpeptidase | CTM90_12580 | Not Available | Negative | 2843546 - 2845978 | 89096.8 |
| pilus assembly protein pilm | CTM90_12585 | Not Available | Positive | 2846270 - 2847268 | 37108.9 |
| pilus assembly protein pils | CTM90_12590 | Not Available | Positive | 2847265 - 2847906 | 24205.4 |
| fimbrial protein | CTM90_12595 | Not Available | Positive | 2847903 - 2848493 | 22672.8 |
| pilus assembly protein pilq | CTM90_12600 | Not Available | Positive | 2848502 - 2849017 | 19251.5 |
| type iv pilus secretin pilq | CTM90_12605 | Not Available | Positive | 2849017 - 2850768 | 63704.1 |
| shikimate kinase arok | CTM90_12610 | Not Available | Positive | 2851098 - 2851616 | 19512.1 |
| 3-dehydroquinate synthase | CTM90_12615 | Not Available | Positive | 2851646 - 2852725 | 38801.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

