Photobacterium damselae strain BT-6 CFSAN065500_43

CoccusMotile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium damselae strain BT-6 (CFSAN065500_43) is a Gram-negative, coccus-shaped bacterium primarily found in marine environments, specifically within Italian aquaculture settings. This strain is characterized by its motility, which is facilitated by the presence of flagella, allowing it to navigate its aquatic habitat effectively. P. damselae is classified as mesophilic, indicating that it thrives within a moderate temperature range, though specific temperature limits are not provided in the data. The bacterium is notable for having a single replicon, which suggests a streamlined genomic organization. This strain is known to infect various hosts, including Homo sapiens (humans) and Alca torda (the razorbill), where it can cause soft-tissue infections. The health implications of P. damselae infections in humans underscore its significance in both aquaculture and public health contexts. The ecological role of Photobacterium damselae in marine environments is likely tied to its interactions with aquatic organisms and its potential impact on fish health in aquaculture. By understanding its pathogenic potential and ecological interactions, effective strategies could be developed to manage its presence and mitigate health risks in both marine ecosystems and human populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium damselae
Strainstrain BT-6 CFSAN065500_43

Profile

Physiology
Gram staining propertiesNegative
ShapeCoccus
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium damselae strain BT-6 CFSAN065500_43
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangemesophilic
HabitatItalian aquaculture; Marine
Biotic relationshipNot Available
Host(s)Homo sapiens, Alca torda
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium damselae strain BT-6 CFSAN065500_43, whole genome

Gene Summary

Adenine Count

1317805 bp

Thymine Count

1343305 bp

Guanine Count

924455 bp

Cytosine Count

882234 bp

Genome Length

4467799 bp

Protein-coding Genes

3795 genes

Non-Coding Genes

159 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
o-antigen ligase family proteinCTM90_12370Not AvailableNegative2796532 - 279772844646.9
lauroyl-kdo(2)-lipid iv(a) myristoyltransferaseCTM90_12375Not AvailableNegative2797728 - 279867836434.0
tetr family transcriptional regulatorCTM90_12380Not AvailablePositive2798850 - 279949125050.9
peptidase m23CTM90_12385Not AvailableNegative2799555 - 280074243755.7
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseCTM90_12390Not AvailableNegative2800760 - 280230155741.0
rhodanese-like domain-containing proteinCTM90_12395Not AvailablePositive2802710 - 280315016121.6
protein-export chaperone secbCTM90_12400Not AvailablePositive2803243 - 280371017163.2
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseCTM90_12405Not AvailablePositive2803734 - 280475035971.2
serine o-acetyltransferaseCTM90_12410Not AvailablePositive2804882 - 280570329299.3
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlCTM90_12415Not AvailableNegative2805762 - 280622617438.9

Displaying genes 2461 – 2470 of 3954 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Soft-tissue infectionCausesPMC8231020

Displaying health effects 1 – 1 of 1 in total