Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| jab domain-containing protein | CTM90_12270 | Not Available | Positive | 2779387 - 2780061 | 24999.2 |
| 50s ribosomal protein l28 | CTM90_12275 | Not Available | Positive | 2780238 - 2780474 | 9034.13 |
| 50s ribosomal protein l33 | CTM90_12280 | Not Available | Positive | 2780489 - 2780656 | 6377.89 |
| hypothetical protein | CTM90_12285 | Not Available | Positive | 2780787 - 2781266 | 18117.3 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | CTM90_12290 | Not Available | Positive | 2781291 - 2782100 | 29589.9 |
| nad-dependent epimerase | CTM90_12295 | Not Available | Positive | 2782236 - 2783240 | 37446.3 |
| phosphopantetheine adenylyltransferase | CTM90_12300 | Not Available | Negative | 2783303 - 2783785 | 17833.5 |
| lipopolysaccharide heptosyltransferase family protein | CTM90_12305 | Not Available | Negative | 2783805 - 2784836 | 38150.0 |
| 3-deoxy-d-manno-octulosonic acid kinase | CTM90_12310 | Not Available | Positive | 2784928 - 2785632 | 27130.6 |
| 3-deoxy-d-manno-octulosonic acid transferase | CTM90_12315 | Not Available | Negative | 2785629 - 2786900 | 47028.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

