Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysine-sensitive aspartokinase 3 | CTM90_08660 | Not Available | Negative | 1982351 - 1983730 | 49415.5 |
| alanine--glyoxylate aminotransferase family protein | CTM90_08665 | Not Available | Positive | 1984281 - 1985399 | 40624.1 |
| ligase | CTM90_08670 | Not Available | Negative | 1985453 - 1987204 | 66642.1 |
| excinuclease abc subunit uvra | CTM90_08675 | Not Available | Negative | 1987357 - 1990182 | 104125.0 |
| single-stranded dna-binding protein | CTM90_08680 | Not Available | Positive | 1990449 - 1990997 | 20102.5 |
| rnase e specificity factor csrd | CTM90_08685 | Not Available | Positive | 1991148 - 1993088 | 73267.8 |
| msha biogenesis protein mshi | CTM90_08690 | Not Available | Positive | 1993253 - 1994704 | 54232.4 |
| msha biogenesis protein mshj | CTM90_08695 | Not Available | Positive | 1994701 - 1995336 | 23914.1 |
| msha biogenesis protein mshk | CTM90_08700 | Not Available | Positive | 1995365 - 1995652 | 10382.4 |
| pilus (msha type) biogenesis protein mshl | CTM90_08705 | Not Available | Positive | 1995666 - 1997360 | 60526.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

