Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CTM90_07820 | Not Available | Positive | 1796694 - 1797185 | 18032.1 |
| rhomboid family intramembrane serine protease | CTM90_07825 | Not Available | Positive | 1797178 - 1797741 | 20984.1 |
| duf1840 domain-containing protein | CTM90_07830 | Not Available | Positive | 1797753 - 1798073 | 11748.2 |
| duf2986 domain-containing protein | CTM90_07835 | Not Available | Positive | 1798160 - 1798339 | 6770.25 |
| penicillin-binding protein 2 | CTM90_07840 | Not Available | Positive | 1798537 - 1800495 | 73139.5 |
| short chain dehydrogenase | CTM90_07845 | Not Available | Negative | 1800579 - 1801301 | 26448.1 |
| ph domain-containing protein | CTM90_07850 | Not Available | Negative | 1801419 - 1801799 | 13932.0 |
| hypothetical protein | CTM90_07855 | Not Available | Positive | 1801814 - 1802098 | 10938.0 |
| dna ligase | CTM90_07860 | Not Available | Negative | 1802201 - 1803112 | 34270.0 |
| pts sugar transporter subunit iic | CTM90_07865 | Not Available | Positive | 1803377 - 1804432 | 36711.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

