Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | CTM90_06805 | Not Available | Negative | 1568473 - 1569594 | 41035.4 |
| cytoskeleton protein rodz | CTM90_06810 | Not Available | Negative | 1569608 - 1570591 | 35702.5 |
| type iv pilus biogenesis/stability protein pilw | CTM90_06815 | Not Available | Negative | 1570584 - 1571339 | 28726.1 |
| bifunctional trna (adenosine(37)-c2)-methyltransferase trmg/ribosomal rna large subunit methyltransferase rlmn | CTM90_06820 | Not Available | Negative | 1571393 - 1572511 | 42007.8 |
| hypothetical protein | CTM90_06825 | Not Available | Positive | 1572565 - 1572819 | 10024.5 |
| nucleoside-diphosphate kinase | CTM90_06830 | Not Available | Negative | 1572894 - 1573319 | 15730.8 |
| aminopeptidase pepb | CTM90_06835 | Not Available | Negative | 1573421 - 1574698 | 45528.7 |
| aminopeptidase pepb | CTM90_06840 | Not Available | Negative | 1574757 - 1576043 | 45775.5 |
| fe-s assembly protein iscx | CTM90_06845 | Not Available | Negative | 1576331 - 1576525 | 7612.94 |
| isc system 2fe-2s type ferredoxin | CTM90_06850 | Not Available | Negative | 1576588 - 1576926 | 12321.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

