Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing sensor histidine kinase | CTM90_06195 | Not Available | Negative | 1445339 - 1446352 | 36856.2 |
| sigma-54-dependent fis family transcriptional regulator | CTM90_06200 | Not Available | Negative | 1446669 - 1448114 | 54149.3 |
| flagella export chaperone flis | CTM90_06205 | Not Available | Negative | 1448406 - 1448801 | 14698.8 |
| flagellar biosynthesis protein flis | CTM90_06210 | Not Available | Negative | 1448844 - 1449155 | 12023.4 |
| flagellar hook protein | CTM90_06215 | Not Available | Negative | 1449168 - 1450595 | 51878.6 |
| flagellin | CTM90_06220 | Not Available | Negative | 1450761 - 1452434 | 56804.5 |
| flagellin | CTM90_06225 | Not Available | Negative | 1452901 - 1454472 | 54491.2 |
| flagellar hook-associated protein 3 | CTM90_06230 | Not Available | Negative | 1454894 - 1456132 | 44940.2 |
| flagellar hook-associated protein flgk | CTM90_06235 | Not Available | Negative | 1456146 - 1458131 | 71016.1 |
| flagellar hook protein | CTM90_06240 | Not Available | Positive | 1458384 - 1458572 | 6792.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

