Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | CTM90_00430 | Not Available | Negative | 99719 - 100408 | 25889.4 |
| glycosyltransferase family 39 protein | CTM90_00435 | Not Available | Positive | 100716 - 102161 | 54316.1 |
| lysr family transcriptional regulator | CTM90_00440 | Not Available | Negative | 102684 - 103589 | 34988.9 |
| eama/rhat family transporter | CTM90_00445 | Not Available | Positive | 103711 - 104607 | 32263.4 |
| hypothetical protein | CTM90_00450 | Not Available | Negative | 104711 - 105406 | 26722.7 |
| hypothetical protein | CTM90_00455 | Not Available | Negative | 106170 - 106607 | 17647.6 |
| hypothetical protein | CTM90_00460 | Not Available | Negative | 106607 - 109486 | 108454.0 |
| type vi secretion system tip protein vgrg | CTM90_00465 | Not Available | Negative | 109501 - 111540 | 75585.2 |
| type vi secretion system tube protein hcp | CTM90_00470 | Not Available | Negative | 111646 - 112164 | 19127.6 |
| penicillin-binding protein 1b | CTM90_00475 | Not Available | Negative | 112528 - 114804 | 84223.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

