Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium damselae |
| Strain | strain BT-6 CFSAN065500_43 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Coccus |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | mesophilic |
| Habitat | Italian aquaculture; Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Alca torda |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1317805 bp
Thymine Count
1343305 bp
Guanine Count
924455 bp
Cytosine Count
882234 bp
Genome Length
4467799 bp
Protein-coding Genes
3795 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | CTM90_05235 | Not Available | Negative | 1236569 - 1237192 | 22622.4 |
| crossover junction endodeoxyribonuclease ruvc | CTM90_05240 | Not Available | Negative | 1237362 - 1237883 | 18323.4 |
| yebc/pmpr family dna-binding transcriptional regulator | CTM90_05245 | Not Available | Negative | 1237900 - 1238646 | 26392.8 |
| aspartate--trna ligase | CTM90_05250 | Not Available | Negative | 1238878 - 1240656 | 66141.4 |
| duf72 domain-containing protein | CTM90_05255 | Not Available | Positive | 1240899 - 1241795 | 34046.8 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | CTM90_05260 | Not Available | Positive | 1241967 - 1242695 | 27174.5 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | CTM90_05265 | Not Available | Positive | 1242714 - 1243688 | 37780.3 |
| hypothetical protein | CTM90_05270 | Not Available | Positive | 1243777 - 1244574 | 29959.9 |
| gonadoliberin iii | CTM90_05275 | Not Available | Positive | 1244593 - 1246104 | 55943.6 |
| alpha-l-glutamate ligase-like protein | CTM90_05280 | Not Available | Positive | 1246108 - 1247082 | 35608.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.

