Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aquimaris |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Photobacterium aquimaris strain BS2 CFSAN065502_83
Accession NumberPYMK00000000.1
Gene Summary
Adenine Count
1405728 bp
Thymine Count
1408889 bp
Guanine Count
926592 bp
Cytosine Count
931333 bp
Genome Length
4672542 bp
Protein-coding Genes
3990 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | CTM88_00050 | Not Available | - | 11719 - 12693 | 37614.2 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | CTM88_00055 | Not Available | - | 12710 - 13438 | 27321.7 |
| duf72 domain-containing protein | CTM88_00060 | Not Available | - | 13612 - 14508 | 33936.9 |
| aspartate--trna ligase | CTM88_00065 | Not Available | + | 14836 - 16620 | 66497.6 |
| yebc/pmpr family dna-binding transcriptional regulator | CTM88_00070 | Not Available | + | 16819 - 17565 | 26301.6 |
| crossover junction endodeoxyribonuclease ruvc | CTM88_00075 | Not Available | + | 17586 - 18107 | 18235.3 |
| holliday junction branch migration protein ruva | CTM88_00080 | Not Available | + | 18303 - 18926 | 22539.5 |
| holliday junction branch migration dna helicase ruvb | CTM88_00085 | Not Available | + | 18954 - 19970 | 37717.4 |
| cytochrome bd-i ubiquinol oxidase subunit cyda | CTM88_00090 | Not Available | + | 20977 - 22563 | 58817.1 |
| cytochrome d ubiquinol oxidase subunit ii | CTM88_00095 | Not Available | + | 22582 - 23718 | 41748.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.