Photobacterium aquimaris strain BS2 CFSAN065502_83

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquimaris strain BS2, designated with the accession number PYMK00000000.1, is an aerobic bacterium characterized by its requirement for oxygen to support metabolic processes. This organism possesses flagella, indicating motility, which can be advantageous for navigating its aquatic environment. Additionally, Photobacterium aquimaris strain BS2 has a single replicon, which refers to the structure of its genetic material, typically characteristic of its chromosomal configuration. The presence of a single replicon may suggest a streamlined genomic architecture, which can influence the efficiency of cellular processes and adaptability to environmental conditions. Ecologically, this strain of Photobacterium is likely to inhabit marine environments, given the genus's association with oceanic ecosystems. Its aerobic nature and motility through flagella suggest that it may play a role in the microbial dynamics of these habitats, potentially contributing to nutrient cycling and the degradation of organic matter within its ecosystem. The ability to move towards oxygen-rich areas could enhance its survival and functional roles in aquatic microbiomes. Understanding such traits helps to elucidate the ecological significance of Photobacterium aquimaris strain BS2 in marine settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquimaris
Strainstrain BS2 CFSAN065502_83

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquimaris strain BS2 CFSAN065502_83, whole genome

Gene Summary

Adenine Count

1405728 bp

Thymine Count

1408889 bp

Guanine Count

926592 bp

Cytosine Count

931333 bp

Genome Length

4672542 bp

Protein-coding Genes

3990 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane lipoprotein chaperone lolaCTM88_02120Not AvailableNegative482806 - 48342622938.4
cell division protein ftskCTM88_02125Not AvailableNegative483534 - 486635112494.0
leucine-responsive transcriptional regulator lrpCTM88_02130Not AvailableNegative487128 - 48762218845.8
thioredoxin-disulfide reductaseCTM88_02135Not AvailablePositive488267 - 48922934542.8
cysteine/glutathione abc transporter permease/atp-binding protein cyddCTM88_02140Not AvailablePositive489346 - 49111865194.3
cysteine/glutathione abc transporter atp-binding protein/permease cydcCTM88_02145Not AvailablePositive491111 - 49283563584.0
leucyl/phenylalanyl-trna--protein transferaseCTM88_02150Not AvailablePositive492965 - 49366926548.8
arginyltransferaseCTM88_02155Not AvailablePositive493680 - 49437227076.5
translation initiation factor if-1CTM88_02160Not AvailablePositive494590 - 4948088162.07
atp-dependent clp protease atp-binding subunit clpaCTM88_02165Not AvailableNegative494968 - 49723583849.4

Displaying genes 461 – 470 of 4156 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.