Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aquimaris |
| Strain | strain BS2 CFSAN065502_83 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1405728 bp
Thymine Count
1408889 bp
Guanine Count
926592 bp
Cytosine Count
931333 bp
Genome Length
4672542 bp
Protein-coding Genes
3990 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | CTM88_19020 | Not Available | Positive | 4309188 - 4310066 | 31143.5 |
| outer membrane protein assembly factor bamc | CTM88_19025 | Not Available | Positive | 4310119 - 4311129 | 37695.1 |
| lipoyl synthase | CTM88_19030 | Not Available | Negative | 4311219 - 4312190 | 36448.1 |
| lipoyl(octanoyl) transferase lipb | CTM88_19035 | Not Available | Negative | 4312187 - 4312837 | 24294.1 |
| hypothetical protein | CTM88_19040 | Not Available | Negative | 4313071 - 4313352 | 10313.5 |
| d-alanyl-d-alanine carboxypeptidase | CTM88_19045 | Not Available | Negative | 4313565 - 4314737 | 43028.7 |
| septal ring lytic transglycosylase rlpa | CTM88_19050 | Not Available | Negative | 4314967 - 4315839 | 32764.6 |
| rod shape-determining protein roda | CTM88_19055 | Not Available | Negative | 4315843 - 4316964 | 40708.7 |
| penicillin-binding protein 2 | CTM88_19060 | Not Available | Negative | 4316964 - 4318919 | 73904.7 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | CTM88_19065 | Not Available | Negative | 4318926 - 4319396 | 17367.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


