Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aquimaris |
| Strain | strain BS2 CFSAN065502_83 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1405728 bp
Thymine Count
1408889 bp
Guanine Count
926592 bp
Cytosine Count
931333 bp
Genome Length
4672542 bp
Protein-coding Genes
3990 genes
Non-Coding Genes
166 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-c crispr-associated protein cas8c/csd1 | CTM88_18265 | Not Available | Negative | 4147667 - 4149643 | 74546.1 |
| type i-c crispr-associated protein cas5 | CTM88_18270 | Not Available | Negative | 4149640 - 4150374 | 28305.7 |
| crispr-associated helicase/endonuclease cas3 | CTM88_18275 | Not Available | Negative | 4150390 - 4152885 | 93288.0 |
| resolvase | CTM88_18280 | Not Available | Negative | 4153175 - 4153768 | 22219.8 |
| atp-binding protein | CTM88_18285 | Not Available | Positive | 4154556 - 4156538 | 74644.1 |
| type ii toxin-antitoxin system rele/pare family toxin | CTM88_18290 | Not Available | Positive | 4156757 - 4157077 | 12109.0 |
| xre family transcriptional regulator | CTM88_18295 | Not Available | Positive | 4157074 - 4157349 | 10005.0 |
| elongation factor tu | CTM88_18305 | Not Available | Positive | 4157644 - 4157774 | 4241.23 |
| preprotein translocase subunit sece | CTM88_18310 | Not Available | Positive | 4158018 - 4158395 | 13427.7 |
| transcription termination/antitermination protein nusg | CTM88_18315 | Not Available | Positive | 4158407 - 4158952 | 20538.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


