Photobacterium aquimaris strain BS2 CFSAN065502_83

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquimaris strain BS2, designated with the accession number PYMK00000000.1, is an aerobic bacterium characterized by its requirement for oxygen to support metabolic processes. This organism possesses flagella, indicating motility, which can be advantageous for navigating its aquatic environment. Additionally, Photobacterium aquimaris strain BS2 has a single replicon, which refers to the structure of its genetic material, typically characteristic of its chromosomal configuration. The presence of a single replicon may suggest a streamlined genomic architecture, which can influence the efficiency of cellular processes and adaptability to environmental conditions. Ecologically, this strain of Photobacterium is likely to inhabit marine environments, given the genus's association with oceanic ecosystems. Its aerobic nature and motility through flagella suggest that it may play a role in the microbial dynamics of these habitats, potentially contributing to nutrient cycling and the degradation of organic matter within its ecosystem. The ability to move towards oxygen-rich areas could enhance its survival and functional roles in aquatic microbiomes. Understanding such traits helps to elucidate the ecological significance of Photobacterium aquimaris strain BS2 in marine settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquimaris
Strainstrain BS2 CFSAN065502_83

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquimaris strain BS2 CFSAN065502_83, whole genome

Gene Summary

Adenine Count

1405728 bp

Thymine Count

1408889 bp

Guanine Count

926592 bp

Cytosine Count

931333 bp

Genome Length

4672542 bp

Protein-coding Genes

3990 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm domain-containing proteinCTM88_17300Not AvailableNegative3938172 - 393924239930.2
peptide deformylaseCTM88_17305Not AvailablePositive3939591 - 394009118463.3
methionyl-trna formyltransferaseCTM88_17310Not AvailablePositive3940116 - 394106033902.8
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbCTM88_17315Not AvailablePositive3941146 - 394242647301.9
trk system potassium transporter trkaCTM88_17320Not AvailablePositive3942553 - 394392950394.6
trkh family potassium uptake proteinCTM88_17325Not AvailablePositive3943936 - 394538152086.6
hemolysin iii family proteinCTM88_17330Not AvailableNegative3945441 - 394610024158.5
fadr family transcriptional regulatorCTM88_17335Not AvailableNegative3946250 - 394692726019.3
hypothetical proteinCTM88_17340Not AvailablePositive3947250 - 39474537443.8
duf1040 domain-containing proteinCTM88_17345Not AvailablePositive3947610 - 394787610128.4

Displaying genes 3451 – 3460 of 4156 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.