Photobacterium aquimaris strain BS2 CFSAN065502_83

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquimaris strain BS2, designated with the accession number PYMK00000000.1, is an aerobic bacterium characterized by its requirement for oxygen to support metabolic processes. This organism possesses flagella, indicating motility, which can be advantageous for navigating its aquatic environment. Additionally, Photobacterium aquimaris strain BS2 has a single replicon, which refers to the structure of its genetic material, typically characteristic of its chromosomal configuration. The presence of a single replicon may suggest a streamlined genomic architecture, which can influence the efficiency of cellular processes and adaptability to environmental conditions. Ecologically, this strain of Photobacterium is likely to inhabit marine environments, given the genus's association with oceanic ecosystems. Its aerobic nature and motility through flagella suggest that it may play a role in the microbial dynamics of these habitats, potentially contributing to nutrient cycling and the degradation of organic matter within its ecosystem. The ability to move towards oxygen-rich areas could enhance its survival and functional roles in aquatic microbiomes. Understanding such traits helps to elucidate the ecological significance of Photobacterium aquimaris strain BS2 in marine settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquimaris
Strainstrain BS2 CFSAN065502_83

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquimaris strain BS2 CFSAN065502_83, whole genome

Gene Summary

Adenine Count

1405728 bp

Thymine Count

1408889 bp

Guanine Count

926592 bp

Cytosine Count

931333 bp

Genome Length

4672542 bp

Protein-coding Genes

3990 genes

Non-Coding Genes

166 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinate dehydrogenase, hydrophobic membrane anchor proteinCTM88_07460Not AvailablePositive1656194 - 165654112954.1
succinate dehydrogenase flavoprotein subunitCTM88_07465Not AvailablePositive1656541 - 165830764043.1
succinate dehydrogenase iron-sulfur subunitCTM88_07470Not AvailablePositive1658323 - 165903626249.8
2-oxoglutarate dehydrogenase e1 componentCTM88_07475Not AvailablePositive1659143 - 1661974105872.0
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferaseCTM88_07480Not AvailablePositive1662001 - 166321544371.6
adp-forming succinate--coa ligase subunit betaCTM88_07485Not AvailablePositive1663369 - 166453541184.5
succinate--coa ligase subunit alphaCTM88_07490Not AvailablePositive1664535 - 166540729881.2
phox family phosphataseCTM88_07495Not AvailableNegative1665481 - 166753875721.4
zinc abc transporter permease subunit znubCTM88_07500Not AvailableNegative1667682 - 166846727820.5
zinc abc transporter atp-binding protein znucCTM88_07505Not AvailableNegative1668467 - 166923128321.6

Displaying genes 1511 – 1520 of 4156 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.