Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium lipolyticum strain DSM 16190, designated CFSAN065514_62, is characterized by the presence of flagella, which suggests it is motile and capable of moving toward various environmental stimuli. This trait is significant for its ecological interactions and potential adaptations in diverse habitats. The strain has a single replicon, indicating a streamlined genetic organization that may relate to its metabolic efficiency and adaptability. The genomic accession number for this strain is PYMC00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional capabilities. Photobacterium lipolyticum is known for its lipolytic properties, which enable it to hydrolyze lipids. This trait could play a crucial role in its ecological niche, particularly in environments where lipid-rich substrates are available. The ability to degrade lipids can facilitate nutrient cycling and may influence the dynamics of microbial communities in aquatic ecosystems. In summary, the motility conferred by flagella, along with the genomic characteristics of Photobacterium lipolyticum strain DSM 16190, highlights its potential for effective adaptation and ecological contribution in lipid-rich environments. Its role in lipid degradation may also enhance nutrient availability, thereby influencing community interactions and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium lipolyticum
Strainstrain DSM 16190 CFSAN065514_62

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62, whole

Gene Summary

Adenine Count

1345533 bp

Thymine Count

1329429 bp

Guanine Count

1118848 bp

Cytosine Count

1149503 bp

Genome Length

4943313 bp

Protein-coding Genes

4192 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
c-di-gmp phosphodiesteraseC9I89_14280Not AvailablePositive3159709 - 316174876768.6
proteaseC9I89_14285Not AvailablePositive3161875 - 316288237295.1
u32 family peptidaseC9I89_14290Not AvailablePositive3162895 - 316377032734.2
lipoprotein nlpiC9I89_14295Not AvailableNegative3163844 - 316475834722.3
polyribonucleotide nucleotidyltransferaseC9I89_14300Not AvailableNegative3164954 - 316707776898.0
30s ribosomal protein s15C9I89_14305Not AvailableNegative3167480 - 316774910259.4
hypothetical proteinC9I89_14310Not AvailablePositive3167912 - 316819610600.1
trna pseudouridine(55) synthase trubC9I89_14315Not AvailableNegative3168193 - 316913734871.9
30s ribosome-binding factor rbfaC9I89_14320Not AvailableNegative3169137 - 316954115329.3
translation initiation factor if-2C9I89_14325Not AvailableNegative3169666 - 317240499746.5

Displaying genes 2801 – 2810 of 4364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.