Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium lipolyticum strain DSM 16190, designated CFSAN065514_62, is characterized by the presence of flagella, which suggests it is motile and capable of moving toward various environmental stimuli. This trait is significant for its ecological interactions and potential adaptations in diverse habitats. The strain has a single replicon, indicating a streamlined genetic organization that may relate to its metabolic efficiency and adaptability. The genomic accession number for this strain is PYMC00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional capabilities. Photobacterium lipolyticum is known for its lipolytic properties, which enable it to hydrolyze lipids. This trait could play a crucial role in its ecological niche, particularly in environments where lipid-rich substrates are available. The ability to degrade lipids can facilitate nutrient cycling and may influence the dynamics of microbial communities in aquatic ecosystems. In summary, the motility conferred by flagella, along with the genomic characteristics of Photobacterium lipolyticum strain DSM 16190, highlights its potential for effective adaptation and ecological contribution in lipid-rich environments. Its role in lipid degradation may also enhance nutrient availability, thereby influencing community interactions and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium lipolyticum
Strainstrain DSM 16190 CFSAN065514_62

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62, whole

Gene Summary

Adenine Count

1345533 bp

Thymine Count

1329429 bp

Guanine Count

1118848 bp

Cytosine Count

1149503 bp

Genome Length

4943313 bp

Protein-coding Genes

4192 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nopaline dehydrogenaseC9I89_13420Not AvailablePositive2956903 - 295801239881.2
c4-dicarboxylate abc transporterC9I89_13425Not AvailablePositive2958076 - 295948249580.0
transcriptional regulatorC9I89_13430Not AvailablePositive2959832 - 296080636793.6
carboxylesteraseC9I89_13435Not AvailableNegative2961039 - 296170424369.5
transcription elongation factorC9I89_13440Not AvailableNegative2961777 - 296225917258.6
short chain dehydrogenaseC9I89_13445Not AvailableNegative2962401 - 296322830058.3
sugar abc transporter substrate-binding proteinC9I89_13450Not AvailableNegative2963547 - 296480945804.8
two-component sensor histidine kinaseC9I89_13455Not AvailableNegative2964840 - 296628554383.5
dna-binding response regulatorC9I89_13460Not AvailableNegative2966307 - 296703227563.5
duf3157 domain-containing proteinC9I89_13465Not AvailableNegative2967435 - 296807022721.5

Displaying genes 2631 – 2640 of 4364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.