Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium lipolyticum strain DSM 16190, designated CFSAN065514_62, is characterized by the presence of flagella, which suggests it is motile and capable of moving toward various environmental stimuli. This trait is significant for its ecological interactions and potential adaptations in diverse habitats. The strain has a single replicon, indicating a streamlined genetic organization that may relate to its metabolic efficiency and adaptability. The genomic accession number for this strain is PYMC00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional capabilities. Photobacterium lipolyticum is known for its lipolytic properties, which enable it to hydrolyze lipids. This trait could play a crucial role in its ecological niche, particularly in environments where lipid-rich substrates are available. The ability to degrade lipids can facilitate nutrient cycling and may influence the dynamics of microbial communities in aquatic ecosystems. In summary, the motility conferred by flagella, along with the genomic characteristics of Photobacterium lipolyticum strain DSM 16190, highlights its potential for effective adaptation and ecological contribution in lipid-rich environments. Its role in lipid degradation may also enhance nutrient availability, thereby influencing community interactions and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium lipolyticum
Strainstrain DSM 16190 CFSAN065514_62

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62, whole

Gene Summary

Adenine Count

1345533 bp

Thymine Count

1329429 bp

Guanine Count

1118848 bp

Cytosine Count

1149503 bp

Genome Length

4943313 bp

Protein-coding Genes

4192 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ligaseC9I89_12100Not AvailableNegative2696922 - 269867366655.7
excinuclease abc subunit uvraC9I89_12105Not AvailableNegative2698766 - 2701600104425.0
single-stranded dna-binding proteinC9I89_12110Not AvailablePositive2701961 - 270251820399.8
lysr family transcriptional regulatorC9I89_12115Not AvailableNegative2702592 - 270347032621.3
rnase e specificity factor csrdC9I89_12120Not AvailablePositive2703692 - 270562372385.9
msha biogenesis protein mshiC9I89_12125Not AvailablePositive2705790 - 270726254308.2
msha biogenesis protein mshjC9I89_12130Not AvailablePositive2707259 - 270789424383.5
msha biogenesis protein mshkC9I89_12135Not AvailablePositive2707920 - 270821310594.7
pilus (msha type) biogenesis protein mshlC9I89_12140Not AvailablePositive2708229 - 270989359289.2
msha biogenesis protein mshmC9I89_12145Not AvailablePositive2709897 - 271075432465.3

Displaying genes 2371 – 2380 of 4364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.