Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium lipolyticum strain DSM 16190, designated CFSAN065514_62, is characterized by the presence of flagella, which suggests it is motile and capable of moving toward various environmental stimuli. This trait is significant for its ecological interactions and potential adaptations in diverse habitats. The strain has a single replicon, indicating a streamlined genetic organization that may relate to its metabolic efficiency and adaptability. The genomic accession number for this strain is PYMC00000000.1, which provides a reference for researchers interested in studying its genetic makeup and functional capabilities. Photobacterium lipolyticum is known for its lipolytic properties, which enable it to hydrolyze lipids. This trait could play a crucial role in its ecological niche, particularly in environments where lipid-rich substrates are available. The ability to degrade lipids can facilitate nutrient cycling and may influence the dynamics of microbial communities in aquatic ecosystems. In summary, the motility conferred by flagella, along with the genomic characteristics of Photobacterium lipolyticum strain DSM 16190, highlights its potential for effective adaptation and ecological contribution in lipid-rich environments. Its role in lipid degradation may also enhance nutrient availability, thereby influencing community interactions and ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium lipolyticum
Strainstrain DSM 16190 CFSAN065514_62

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium lipolyticum strain DSM 16190 CFSAN065514_62, whole

Gene Summary

Adenine Count

1345533 bp

Thymine Count

1329429 bp

Guanine Count

1118848 bp

Cytosine Count

1149503 bp

Genome Length

4943313 bp

Protein-coding Genes

4192 genes

Non-Coding Genes

172 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose abc transporter substrate-binding protein rbsbC9I89_10565Not AvailableNegative2390003 - 239088130681.0
ribose abc transporter permeaseC9I89_10570Not AvailableNegative2390967 - 239196835015.9
ribose abc transporter atp-binding protein rbsaC9I89_10575Not AvailableNegative2391965 - 239347054995.9
d-ribose pyranaseC9I89_10580Not AvailableNegative2393507 - 239392615151.3
molybdenum-dependent transcriptional regulatorC9I89_10585Not AvailableNegative2394273 - 239506428392.3
hypothetical proteinC9I89_10590Not AvailablePositive2395193 - 239554913089.9
hypothetical proteinC9I89_10595Not AvailablePositive2395786 - 239674233296.8
sigma-54-dependent fis family transcriptional regulatorC9I89_10600Not AvailableNegative2396820 - 239857465627.1
knotted carbamoyltransferase ygewC9I89_10605Not AvailablePositive2399031 - 240021844596.2
diaminopropionate ammonia-lyaseC9I89_10610Not AvailablePositive2400321 - 240152643529.9

Displaying genes 2071 – 2080 of 4364 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.