Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium rosenbergii strain DSM 19138, also known by its accession number PYMB00000000.1, is a notable member of the Photobacterium genus. This strain is characterized by the presence of flagella, which suggests a capability for motility. The ability to move is critical for many bacteria, as it allows them to navigate their environments in search of nutrients and optimal living conditions. This strain possesses a single replicon, indicating a streamlined genetic organization. Having a single replicon can be associated with certain metabolic efficiencies, potentially influencing its ecological role within its habitat. Photobacterium species, including strain DSM 19138, are generally known to inhabit marine environments, where they can play significant roles in biogeochemical processes. The presence of flagella in this strain may enhance its ability to adapt to dynamic aquatic conditions, allowing for interactions with other microbial communities. In conclusion, the motility provided by flagella, combined with the single replicon structure, may contribute to the ecological success of Photobacterium rosenbergii strain DSM 19138 in marine ecosystems, where it can engage in various interactions and contribute to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium rosenbergii
Strainstrain DSM 19138 CFSAN065515_74

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74, whole

Gene Summary

Adenine Count

1660743 bp

Thymine Count

1669496 bp

Guanine Count

1530785 bp

Cytosine Count

1493412 bp

Genome Length

6354436 bp

Protein-coding Genes

5617 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter atp-binding proteinC9J01_25170Not AvailableNegative5485395 - 548613226935.4
abc transporter permeaseC9J01_25175Not AvailableNegative5486129 - 548680024983.4
amino acid abc transporter substrate-binding proteinC9J01_25180Not AvailableNegative5486889 - 548764428017.3
chromosomal replication initiator protein dnaaC9J01_25185Not AvailablePositive5487952 - 548937353459.9
dna polymerase iii subunit betaC9J01_25190Not AvailablePositive5489375 - 549047540693.8
dna replication/repair protein recfC9J01_25195Not AvailablePositive5490480 - 549155940678.9
dna topoisomerase (atp-hydrolyzing) subunit bC9J01_25200Not AvailablePositive5491579 - 549399389533.2
heat shock protein ibpaC9J01_25205Not AvailablePositive5494392 - 549483216984.0
valine--pyruvate transaminaseC9J01_25210Not AvailableNegative5495492 - 549674246694.2
glycine--trna ligase subunit betaC9J01_25215Not AvailableNegative5497161 - 549923075651.6

Displaying genes 5011 – 5020 of 5831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.