Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium rosenbergii strain DSM 19138, also known by its accession number PYMB00000000.1, is a notable member of the Photobacterium genus. This strain is characterized by the presence of flagella, which suggests a capability for motility. The ability to move is critical for many bacteria, as it allows them to navigate their environments in search of nutrients and optimal living conditions. This strain possesses a single replicon, indicating a streamlined genetic organization. Having a single replicon can be associated with certain metabolic efficiencies, potentially influencing its ecological role within its habitat. Photobacterium species, including strain DSM 19138, are generally known to inhabit marine environments, where they can play significant roles in biogeochemical processes. The presence of flagella in this strain may enhance its ability to adapt to dynamic aquatic conditions, allowing for interactions with other microbial communities. In conclusion, the motility provided by flagella, combined with the single replicon structure, may contribute to the ecological success of Photobacterium rosenbergii strain DSM 19138 in marine ecosystems, where it can engage in various interactions and contribute to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium rosenbergii
Strainstrain DSM 19138 CFSAN065515_74

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74, whole

Gene Summary

Adenine Count

1660743 bp

Thymine Count

1669496 bp

Guanine Count

1530785 bp

Cytosine Count

1493412 bp

Genome Length

6354436 bp

Protein-coding Genes

5617 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
prepilin peptidaseC9J01_20725Not AvailableNegative4553436 - 455430532192.2
n-acetylmuramoyl-l-alanine amidaseC9J01_20730Not AvailableNegative4554463 - 45546125245.06
type ii secretion system protein fC9J01_20735Not AvailableNegative4554645 - 455586544959.8
type iv-a pilus assembly atpase pilbC9J01_20740Not AvailableNegative4555925 - 455762562375.2
prepilin-type cleavage/methylation domain-containing proteinC9J01_20745Not AvailableNegative4557626 - 455805415024.2
nicotinate-nucleotide diphosphorylaseC9J01_20750Not AvailableNegative4558424 - 455931132317.6
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdC9J01_20755Not AvailablePositive4559704 - 456025820711.5
pyruvate dehydrogenase complex transcriptional repressor pdhrC9J01_20760Not AvailablePositive4560573 - 456134629392.1
pyruvate dehydrogenase (acetyl-transferring), homodimeric typeC9J01_20765Not AvailablePositive4561429 - 456409299547.3
pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferaseC9J01_20770Not AvailablePositive4564107 - 456493027771.9

Displaying genes 4131 – 4140 of 5831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.