Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium rosenbergii strain DSM 19138, also known by its accession number PYMB00000000.1, is a notable member of the Photobacterium genus. This strain is characterized by the presence of flagella, which suggests a capability for motility. The ability to move is critical for many bacteria, as it allows them to navigate their environments in search of nutrients and optimal living conditions. This strain possesses a single replicon, indicating a streamlined genetic organization. Having a single replicon can be associated with certain metabolic efficiencies, potentially influencing its ecological role within its habitat. Photobacterium species, including strain DSM 19138, are generally known to inhabit marine environments, where they can play significant roles in biogeochemical processes. The presence of flagella in this strain may enhance its ability to adapt to dynamic aquatic conditions, allowing for interactions with other microbial communities. In conclusion, the motility provided by flagella, combined with the single replicon structure, may contribute to the ecological success of Photobacterium rosenbergii strain DSM 19138 in marine ecosystems, where it can engage in various interactions and contribute to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium rosenbergii
Strainstrain DSM 19138 CFSAN065515_74

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74, whole

Gene Summary

Adenine Count

1660743 bp

Thymine Count

1669496 bp

Guanine Count

1530785 bp

Cytosine Count

1493412 bp

Genome Length

6354436 bp

Protein-coding Genes

5617 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zinc abc transporter permeaseC9J01_12620Not AvailableNegative2756582 - 275736727778.5
zinc abc transporter atp-binding protein znucC9J01_12625Not AvailableNegative2757360 - 275814529070.1
zinc abc transporter substrate-binding proteinC9J01_12630Not AvailablePositive2758239 - 275927938648.4
murein dd-endopeptidase mepmC9J01_12635Not AvailablePositive2759282 - 276062549624.8
hypothetical proteinC9J01_12640Not AvailablePositive2760786 - 2764598141771.0
ferrous iron transport protein aC9J01_12645Not AvailablePositive2764979 - 27652067981.08
ferrous iron transporter bC9J01_12650Not AvailablePositive2765206 - 276748582584.2
ferrous iron transport protein cC9J01_12655Not AvailablePositive2767482 - 27677279162.26
hit family proteinC9J01_12660Not AvailableNegative2767777 - 276820815787.0
duf924 domain-containing proteinC9J01_12665Not AvailablePositive2768479 - 276908423365.6

Displaying genes 2531 – 2540 of 5831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.