Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium rosenbergii strain DSM 19138, also known by its accession number PYMB00000000.1, is a notable member of the Photobacterium genus. This strain is characterized by the presence of flagella, which suggests a capability for motility. The ability to move is critical for many bacteria, as it allows them to navigate their environments in search of nutrients and optimal living conditions. This strain possesses a single replicon, indicating a streamlined genetic organization. Having a single replicon can be associated with certain metabolic efficiencies, potentially influencing its ecological role within its habitat. Photobacterium species, including strain DSM 19138, are generally known to inhabit marine environments, where they can play significant roles in biogeochemical processes. The presence of flagella in this strain may enhance its ability to adapt to dynamic aquatic conditions, allowing for interactions with other microbial communities. In conclusion, the motility provided by flagella, combined with the single replicon structure, may contribute to the ecological success of Photobacterium rosenbergii strain DSM 19138 in marine ecosystems, where it can engage in various interactions and contribute to nutrient cycling.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium rosenbergii
Strainstrain DSM 19138 CFSAN065515_74

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium rosenbergii strain DSM 19138 CFSAN065515_74, whole

Gene Summary

Adenine Count

1660743 bp

Thymine Count

1669496 bp

Guanine Count

1530785 bp

Cytosine Count

1493412 bp

Genome Length

6354436 bp

Protein-coding Genes

5617 genes

Non-Coding Genes

214 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC9J01_08975Not AvailableNegative1958563 - 19588209501.75
pyroglutamyl-peptidase iC9J01_08980Not AvailablePositive1959026 - 195971224618.6
phenylalanine--trna ligase subunit alphaC9J01_08985Not AvailablePositive1959865 - 196084837028.1
phenylalanine--trna ligase subunit betaC9J01_08990Not AvailablePositive1960867 - 196325486398.2
integration host factor subunit alphaC9J01_08995Not AvailablePositive1963849 - 196414511104.2
succinylglutamate desuccinylaseC9J01_09000Not AvailablePositive1964334 - 196539539656.2
vitamin b12 abc transporter permease btucC9J01_09005Not AvailablePositive1965489 - 196648135384.2
vitamin b12 abc transporter atp-binding protein btudC9J01_09010Not AvailablePositive1966492 - 196728028498.8
oligoendopeptidase fC9J01_09015Not AvailablePositive1967324 - 196913567939.1
porin family proteinC9J01_09020Not AvailableNegative1969262 - 196988823113.2

Displaying genes 1811 – 1820 of 5831 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.