Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 is a notable member of the Photobacterium genus, characterized by the presence of flagella, which suggests that this strain has the capacity for motility. This motility may play a role in its ecological interactions and adaptability within its environment. The strain is defined by a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and stability. The genomic information for this strain is accessible under the accession number PYMA00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. The presence of flagella implies that Photobacterium sanctipauli can actively navigate its aquatic environment, which may enhance its survival and competitive capabilities among other microorganisms. This trait could facilitate colonization in nutrient-rich niches, allowing the strain to exploit available resources effectively. Such motility may also influence its interactions with other microbial species, including potential symbiotic or antagonistic relationships. In summary, Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 exhibits key traits such as motility due to flagella and a single replicon, which may contribute to its ecological adaptability. Understanding these characteristics can provide insights into its role within aquatic ecosystems and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sanctipauli
Strainstrain DSM 100436 CFSAN065516_51

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51, whole

Gene Summary

Adenine Count

1527891 bp

Thymine Count

1514693 bp

Guanine Count

1394596 bp

Cytosine Count

1403032 bp

Genome Length

5840212 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimeraseC9I98_24950Not AvailablePositive5547749 - 554924551572.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeC9I98_24955Not AvailablePositive5549245 - 554970917463.7
n-acetylmuramoyl-l-alanine amidaseC9I98_24960Not AvailablePositive5549714 - 555142062044.7
dna mismatch repair endonuclease mutlC9I98_24965Not AvailablePositive5551423 - 555359178573.4
trna (adenosine(37)-n6)-dimethylallyltransferase miaaC9I98_24970Not AvailablePositive5553584 - 555451934816.1
rna chaperone hfqC9I98_24975Not AvailablePositive5554606 - 555487510105.2
gtpase hflxC9I98_24980Not AvailablePositive5554902 - 555619148502.1
ftsh protease activity modulator hflkC9I98_24985Not AvailablePositive5556249 - 555740642313.6
protease modulator hflcC9I98_24990Not AvailablePositive5557409 - 555840737373.7
duf2065 domain-containing proteinC9I98_24995Not AvailablePositive5558516 - 55587107017.83

Displaying genes 4941 – 4950 of 5213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.