Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 is a notable member of the Photobacterium genus, characterized by the presence of flagella, which suggests that this strain has the capacity for motility. This motility may play a role in its ecological interactions and adaptability within its environment. The strain is defined by a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and stability. The genomic information for this strain is accessible under the accession number PYMA00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. The presence of flagella implies that Photobacterium sanctipauli can actively navigate its aquatic environment, which may enhance its survival and competitive capabilities among other microorganisms. This trait could facilitate colonization in nutrient-rich niches, allowing the strain to exploit available resources effectively. Such motility may also influence its interactions with other microbial species, including potential symbiotic or antagonistic relationships. In summary, Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 exhibits key traits such as motility due to flagella and a single replicon, which may contribute to its ecological adaptability. Understanding these characteristics can provide insights into its role within aquatic ecosystems and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sanctipauli
Strainstrain DSM 100436 CFSAN065516_51

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51, whole

Gene Summary

Adenine Count

1527891 bp

Thymine Count

1514693 bp

Guanine Count

1394596 bp

Cytosine Count

1403032 bp

Genome Length

5840212 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine--trna ligase subunit betaC9I98_23815Not AvailablePositive5291125 - 529319475901.8
valine--pyruvate transaminaseC9I98_23820Not AvailablePositive5293556 - 529482146790.1
heat shock protein ibpaC9I98_23825Not AvailableNegative5294944 - 529538416949.9
dna topoisomerase (atp-hydrolyzing) subunit bC9I98_23830Not AvailableNegative5295606 - 529802089493.1
dna replication and repair protein recfC9I98_23835Not AvailableNegative5298040 - 529911940852.1
dna polymerase iii subunit betaC9I98_23840Not AvailableNegative5299122 - 530022240881.1
chromosomal replication initiator protein dnaaC9I98_23845Not AvailableNegative5300224 - 530162753045.4
amino acid abc transporter substrate-binding proteinC9I98_23850Not AvailablePositive5301949 - 530270428101.2
amino acid abc transporter permeaseC9I98_23855Not AvailablePositive5302797 - 530346825018.6
amino acid abc transporter atp-binding proteinC9I98_23860Not AvailablePositive5303465 - 530423528140.9

Displaying genes 4721 – 4730 of 5213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.