Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 is a notable member of the Photobacterium genus, characterized by the presence of flagella, which suggests that this strain has the capacity for motility. This motility may play a role in its ecological interactions and adaptability within its environment. The strain is defined by a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and stability. The genomic information for this strain is accessible under the accession number PYMA00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. The presence of flagella implies that Photobacterium sanctipauli can actively navigate its aquatic environment, which may enhance its survival and competitive capabilities among other microorganisms. This trait could facilitate colonization in nutrient-rich niches, allowing the strain to exploit available resources effectively. Such motility may also influence its interactions with other microbial species, including potential symbiotic or antagonistic relationships. In summary, Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 exhibits key traits such as motility due to flagella and a single replicon, which may contribute to its ecological adaptability. Understanding these characteristics can provide insights into its role within aquatic ecosystems and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sanctipauli
Strainstrain DSM 100436 CFSAN065516_51

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51, whole

Gene Summary

Adenine Count

1527891 bp

Thymine Count

1514693 bp

Guanine Count

1394596 bp

Cytosine Count

1403032 bp

Genome Length

5840212 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(p)ppgpp synthetaseC9I98_21695Not AvailablePositive4834638 - 483532726749.8
hybrid sensor histidine kinase/response regulatorC9I98_21705Not AvailableNegative4836892 - 483933390515.0
prephenate dehydrataseC9I98_21710Not AvailableNegative4839573 - 484031326368.5
cold-shock proteinC9I98_21715Not AvailableNegative4840668 - 48408777476.77
cold-shock proteinC9I98_21720Not AvailableNegative4841367 - 48415767467.75
duf496 domain-containing proteinC9I98_21725Not AvailablePositive4842043 - 484235112216.7
mlta-interacting mipa family proteinC9I98_21730Not AvailablePositive4842553 - 484392951791.1
fmn-dependent nadh-azoreductaseC9I98_21735Not AvailableNegative4844002 - 484459221098.3
16s rrna (cytosine(1407)-c(5))-methyltransferase rsmfC9I98_21740Not AvailableNegative4845086 - 484651653213.6
mce family proteinC9I98_21745Not AvailableNegative4846630 - 484926095763.2

Displaying genes 4301 – 4310 of 5213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.