Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 is a notable member of the Photobacterium genus, characterized by the presence of flagella, which suggests that this strain has the capacity for motility. This motility may play a role in its ecological interactions and adaptability within its environment. The strain is defined by a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and stability. The genomic information for this strain is accessible under the accession number PYMA00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. The presence of flagella implies that Photobacterium sanctipauli can actively navigate its aquatic environment, which may enhance its survival and competitive capabilities among other microorganisms. This trait could facilitate colonization in nutrient-rich niches, allowing the strain to exploit available resources effectively. Such motility may also influence its interactions with other microbial species, including potential symbiotic or antagonistic relationships. In summary, Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 exhibits key traits such as motility due to flagella and a single replicon, which may contribute to its ecological adaptability. Understanding these characteristics can provide insights into its role within aquatic ecosystems and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sanctipauli
Strainstrain DSM 100436 CFSAN065516_51

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51, whole

Gene Summary

Adenine Count

1527891 bp

Thymine Count

1514693 bp

Guanine Count

1394596 bp

Cytosine Count

1403032 bp

Genome Length

5840212 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator leuoC9I98_21025Not AvailableNegative4711341 - 471229735719.6
glycosyltransferaseC9I98_21030Not AvailableNegative4712643 - 471375242132.4
phosphatase pap2 family proteinC9I98_21035Not AvailableNegative4713760 - 471426618576.9
acrb/acrd/acrf family proteinC9I98_21040Not AvailableNegative4714392 - 4717502114439.0
hlyd family secretion proteinC9I98_21045Not AvailableNegative4717499 - 471885749334.1
tetr/acrr family transcriptional regulatorC9I98_21050Not AvailableNegative4718844 - 471949724803.4
2-isopropylmalate synthaseC9I98_21055Not AvailablePositive4720078 - 472162856368.0
3-isopropylmalate dehydrogenaseC9I98_21060Not AvailablePositive4721631 - 472271939361.9
3-isopropylmalate dehydratase large subunitC9I98_21065Not AvailablePositive4722743 - 472417651180.1
3-isopropylmalate dehydratase small subunitC9I98_21070Not AvailablePositive4724193 - 472479522397.5

Displaying genes 4221 – 4230 of 5213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.