Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 is a notable member of the Photobacterium genus, characterized by the presence of flagella, which suggests that this strain has the capacity for motility. This motility may play a role in its ecological interactions and adaptability within its environment. The strain is defined by a single replicon, indicating a streamlined genetic structure that may contribute to its metabolic efficiency and stability. The genomic information for this strain is accessible under the accession number PYMA00000000.1, providing a reference for researchers interested in studying its genetic makeup and potential applications. The presence of flagella implies that Photobacterium sanctipauli can actively navigate its aquatic environment, which may enhance its survival and competitive capabilities among other microorganisms. This trait could facilitate colonization in nutrient-rich niches, allowing the strain to exploit available resources effectively. Such motility may also influence its interactions with other microbial species, including potential symbiotic or antagonistic relationships. In summary, Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51 exhibits key traits such as motility due to flagella and a single replicon, which may contribute to its ecological adaptability. Understanding these characteristics can provide insights into its role within aquatic ecosystems and its potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium sanctipauli
Strainstrain DSM 100436 CFSAN065516_51

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium sanctipauli strain DSM 100436 CFSAN065516_51, whole

Gene Summary

Adenine Count

1527891 bp

Thymine Count

1514693 bp

Guanine Count

1394596 bp

Cytosine Count

1403032 bp

Genome Length

5840212 bp

Protein-coding Genes

5034 genes

Non-Coding Genes

179 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic nitrate reductase electron transfer subunitC9I98_05875Not AvailablePositive1360353 - 136079016220.5
cytochrome cC9I98_05880Not AvailablePositive1360801 - 136138222372.5
lipid a biosynthesis lauroyl acyltransferaseC9I98_05885Not AvailablePositive1361724 - 136268936306.1
lipid a biosynthesis lauroyl acyltransferaseC9I98_05890Not AvailablePositive1363006 - 136393535863.5
sodium:alanine symporter family proteinC9I98_05895Not AvailablePositive1364148 - 136553047973.5
type i secretion proteinC9I98_05900Not AvailablePositive1365832 - 1371705189331.0
type i secretion system permease/atpaseC9I98_05905Not AvailablePositive1371787 - 137351163040.6
hlyd family type i secretion periplasmic adaptor subunitC9I98_05910Not AvailablePositive1373508 - 137480948378.1
quercetin 2,3-dioxygenaseC9I98_05915Not AvailableNegative1374883 - 137572230607.6
haaap family serine/threonine permeaseC9I98_05920Not AvailableNegative1375899 - 137719146440.4

Displaying genes 1231 – 1240 of 5213 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.