Photobacterium swingsii strain DSM 24669 CFSAN065517_45

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium swingsii strain DSM 24669 CFSAN065517_45 is a Gram-negative bacterium characterized by its ovoid shape and the presence of flagella, which facilitates motility. This organism exhibits a facultative aerobe/anaerobe oxygen requirement, allowing it to thrive in various environments by adapting to the availability of oxygen. The strain is notable for its single replicon, which is indicative of a streamlined genetic architecture that may contribute to its adaptability and evolutionary fitness. In terms of genomic data, Photobacterium swingsii is cataloged under the accession number PYLZ00000000.1, which provides a reference for researchers interested in further genetic and functional studies. Understanding the traits of Photobacterium swingsii can offer insights into its ecological roles, particularly in marine environments where such bacteria are often found. Their ability to switch between aerobic and anaerobic respiration may enable them to inhabit diverse niches, contributing to nutrient cycling and organic matter decomposition. This adaptability likely plays a critical role in the microbial dynamics of their ecosystems, allowing them to exploit various ecological resources effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium swingsii
Strainstrain DSM 24669 CFSAN065517_45

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium swingsii strain DSM 24669 CFSAN065517_45
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium swingsii strain DSM 24669 CFSAN065517_45, whole

Gene Summary

Adenine Count

1560828 bp

Thymine Count

1562400 bp

Guanine Count

1207750 bp

Cytosine Count

1217419 bp

Genome Length

5548397 bp

Protein-coding Genes

4739 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
amino acid abc transporter atp-binding proteinC9I94_22985Not AvailableNegative5189469 - 519023928414.2
abc transporter permeaseC9I94_22990Not AvailableNegative5190236 - 519090725218.7
amino acid abc transporter substrate-binding proteinC9I94_22995Not AvailableNegative5191060 - 519180327309.6
chromosomal replication initiator protein dnaaC9I94_23000Not AvailablePositive5192123 - 519353253329.7
dna polymerase iii subunit betaC9I94_23005Not AvailablePositive5193534 - 519463440865.9
dna replication and repair protein recfC9I94_23010Not AvailablePositive5194638 - 519571740763.0
dna topoisomerase (atp-hydrolyzing) subunit bC9I94_23015Not AvailablePositive5195737 - 519815489610.2
heat shock protein ibpaC9I94_23020Not AvailablePositive5198418 - 519885817217.2
valine--pyruvate transaminaseC9I94_23025Not AvailableNegative5199103 - 520034745908.1
glycine--trna ligase subunit betaC9I94_23030Not AvailableNegative5200708 - 520279276154.3

Displaying genes 4561 – 4570 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.