Photobacterium swingsii strain DSM 24669 CFSAN065517_45

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium swingsii strain DSM 24669 CFSAN065517_45 is a Gram-negative bacterium characterized by its ovoid shape and the presence of flagella, which facilitates motility. This organism exhibits a facultative aerobe/anaerobe oxygen requirement, allowing it to thrive in various environments by adapting to the availability of oxygen. The strain is notable for its single replicon, which is indicative of a streamlined genetic architecture that may contribute to its adaptability and evolutionary fitness. In terms of genomic data, Photobacterium swingsii is cataloged under the accession number PYLZ00000000.1, which provides a reference for researchers interested in further genetic and functional studies. Understanding the traits of Photobacterium swingsii can offer insights into its ecological roles, particularly in marine environments where such bacteria are often found. Their ability to switch between aerobic and anaerobic respiration may enable them to inhabit diverse niches, contributing to nutrient cycling and organic matter decomposition. This adaptability likely plays a critical role in the microbial dynamics of their ecosystems, allowing them to exploit various ecological resources effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium swingsii
Strainstrain DSM 24669 CFSAN065517_45

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium swingsii strain DSM 24669 CFSAN065517_45
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium swingsii strain DSM 24669 CFSAN065517_45, whole

Gene Summary

Adenine Count

1560828 bp

Thymine Count

1562400 bp

Guanine Count

1207750 bp

Cytosine Count

1217419 bp

Genome Length

5548397 bp

Protein-coding Genes

4739 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm peptidoglycan-binding domain-containing proteinC9I94_22735Not AvailableNegative5133447 - 513452039342.0
peptide deformylaseC9I94_22740Not AvailablePositive5134854 - 513536619091.0
methionyl-trna formyltransferaseC9I94_22745Not AvailablePositive5135390 - 513633434184.2
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbC9I94_22750Not AvailablePositive5136449 - 513772647638.9
trk system potassium transporter trkaC9I94_22755Not AvailablePositive5137868 - 513924450256.6
trkh family potassium uptake proteinC9I94_22760Not AvailablePositive5139251 - 514069652067.6
hemolysin iii family proteinC9I94_22765Not AvailableNegative5140802 - 514145523707.1
sporulation control protein spo0mC9I94_22770Not AvailableNegative5141592 - 514238029090.8
fadr family transcriptional regulatorC9I94_22775Not AvailableNegative5142654 - 514333125797.1
duf1040 domain-containing proteinC9I94_22780Not AvailablePositive5143987 - 514425310344.7

Displaying genes 4511 – 4520 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.